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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10491308_10495724_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10491308 - 10495724

Intron Length:

4417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTGGCCTT

5'SS Class:

weak_major

3'SS Sequence:

ATTTCTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GGGGATTTGATT

Flanking Amino Acid:

PENNVACKGRPFW*

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

55.7

48.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

84.1

0.77

0.7

78.3

29.7

Minor 5ss

38.3

-1.3

3.4

49.3

46.6

Minor BPS

46.6

-0.1

1.6

56.69

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017594

10491296 - 10502673

11378