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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10548239_10550478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10548239 - 10550478

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

AATACCTTATAC

Flanking Amino Acid:

ANHQRESVPLCPLPTASVGS

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

0.5

59.6

38.6

Major PPT

89.7

0.89

0.6

89.1

19.9

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

54.8

0.13

1.7

64.68

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005696

10548080 - 10565741

17662