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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10550804_10551361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10550804 - 10551361

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ACCTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAAAC

Flanking Amino Acid:

EEPKTRDVHCRTTRESQHKH

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.3

0.52

0.9

65.5

35.5

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

51.7

0.03

1.6

61.68

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005696

10548080 - 10565741

17662