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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10552716_10554602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10552716 - 10554602

Intron Length:

1887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTCG

5'SS Class:

major

3'SS Sequence:

TATCTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GTGTGCATATCT

Flanking Amino Acid:

HTESKAEIKKLKEQLCQADQ

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

42.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.6

0.73

0.8

74.1

36.3

Minor 5ss

42.6

-0.8

3.1

56.7

47.6

Minor BPS

46.8

-0.1

2.2

69.61

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005696

10548080 - 10565741

17662