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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10556418_10556644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10556418 - 10556644

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

CTTGCAACAATC

Flanking Amino Acid:

ELRQSKKMLEVLQDEKMELR

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

79.5

0.66

0.7

73.3

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

43.3

-0.5

2.1

56.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005696

10548080 - 10565741

17662