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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10563940_10565697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10563940 - 10565697

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GTGACCTGAACC

Flanking Amino Acid:

LEGMQRNGQGSGGFLTSCEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

85.8

0.81

0.7

77.3

31.4

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

63.7

0.41

1.5

69.36

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005696

10548080 - 10565741

17662