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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10584686_10585227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10584686 - 10585227

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTTCTCTTGACA

Flanking Amino Acid:

PDKVALLQGKVEENRSCLFF

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

0.45

0.9

67.6

25.3

Major PPT

82.7

0.74

0.9

79.9

32.1

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

77.4

0.86

1.1

83.73

29.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005192

10584093 - 10585835

1743