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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10721681_10728707_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10721681 - 10728707

Intron Length:

7027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAAGCGT

5'SS Class:

weak_major

3'SS Sequence:

TACGAGAGATTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCAAAAT

U12 Branch Point Sequence:

TGCACGCAAAAT

Flanking Amino Acid:

SATSLAQVRLHYSGGISVRQ

Intron Amino Acid Position:

1306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.1

52.4

44.1

Major BPS

46.1

-0.2

1.3

49.6

40.9

Major PPT

47.8

-0.1

1.1

41.2

42.3

Minor 5ss

34.4

-1.8

3.6

52.8

45.4

Minor BPS

37.2

-0.9

2.4

55.38

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412