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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10728886_10729800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10728886 - 10729800

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CCTGCTTTAACA

Flanking Amino Acid:

QETADEIIVFSCGHLYHSLC

Intron Amino Acid Position:

1246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

78.8

0.65

0.8

71.6

32.9

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

68.3

0.57

1.4

70.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412