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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10753676_10754790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10753676 - 10754790

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTTCTCGTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAA

U12 Branch Point Sequence:

TGAAACATGATT

Flanking Amino Acid:

RLIQMAEKAEFYQICEFMYE

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

73.5

37.9

Major BPS

64.3

0.35

1.2

55.4

Major PPT

82.6

0.73

0.8

81.3

30.7

Minor 5ss

44.5

-0.6

2.9

64.2

41.4

Minor BPS

46.3

-0.2

1.8

63.78

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412