Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_10765187_10765700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10765187 - 10765700

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTTGATAACT

Flanking Amino Acid:

IVDYCLLLQRTDLLFNQIYD

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.3

71.6

40.2

Major BPS

84.4

0.85

34.5

Major PPT

80.3

0.68

0.7

73.6

31.4

Minor 5ss

35.9

-1.6

2.8

37.6

Minor BPS

54.4

0.22

2.3

81.33

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412