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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10768372_10770589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10768372 - 10770589

Intron Length:

2218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TACTTGTTATTT

Flanking Amino Acid:

HVMTLRSWRERVDHLLKQER

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.9

0.67

0.8

78.1

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

47.8

-0

2.2

67.92

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412