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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10776352_10777377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10776352 - 10777377

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATTATCTGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTCTTAGTG

Flanking Amino Acid:

PPGTAILHIKFTDDPTLAIC

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.5

30.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.1

0.5

69.9

40.7

Minor 5ss

33.1

-1.9

42.8

44.4

Minor BPS

64.2

0.31

1.6

68.1

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003823

10718251 - 10794662

76412