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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10792679_10794671_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10792679 - 10794671

Intron Length:

1993

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCAATAAAT

5'SS Class:

weak_major

3'SS Sequence:

GCCGCAGAGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GCCCCTTTAACG

Flanking Amino Acid:

VSDDLFTVVAYRSGCAGAGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.08

1.3

60.2

44.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

39.6

-0.6

1.6

31.2

35.2

Minor 5ss

26.7

-2.7

3.9

42.2

39.6

Minor BPS

61.2

0.21

1.4

57.13

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003701

10792474 - 10796817

4344