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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10806709_10808379_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10806709 - 10808379

Intron Length:

1671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

AATAACTTACCA

Flanking Amino Acid:

GEHNIEVKEQTLCILANIAD

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

80.5

Major BPS

61.3

0.28

30.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

77.1

0.91

1.7

84.6

33.2

Minor BPS

52.4

0.07

1.8

65.22

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018930

10804755 - 10814418

9664