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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10848122_10862351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10848122 - 10862351

Intron Length:

14230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGATTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

TCTTTCTGGATT

Flanking Amino Acid:

LDPQKVLQGVIDMKNAVIGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

34.8

Major BPS

0.5

0.9

61.4

35.9

Major PPT

76.5

0.6

68.7

41.2

Minor 5ss

38.3

-1.3

3.1

54.8

42.5

Minor BPS

64.1

0.52

1.4

78.87

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003338

10815744 - 10864208

48465