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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10862429_10864160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10862429 - 10864160

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AAACTATTAAAA

Flanking Amino Acid:

EAPLRMSVLSEVTASSRHYV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

90.6

0.91

0.6

85.8

21.3

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

48.3

-0.1

1.6

56.28

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003230

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003338

10815744 - 10864208

48465