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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1087039_1101503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1087039 - 1101503

Intron Length:

14465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTGTCTTACAG

Flanking Amino Acid:

PGPGPSPGPADKLLVFTVAT

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

89.8

0.9

0.7

84.2

30.9

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

52.6

-0

1.9

63.72

44.3

Associated Gene:

Gene:

PLOD2

Ensembl Gene ID:

ENSAPLG00000011127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046994

1075107 - 1134504

59398

ENSAPLT00000040431

1086663 - 1134290

47628

ENSAPLT00000039176

1086663 - 1134290

47628