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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10907931_10913007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10907931 - 10913007

Intron Length:

5077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGCTGG

5'SS Class:

major

3'SS Sequence:

GTTTATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATGTTACAG

Flanking Amino Acid:

PEFHSRYITTVIQRIFYTVN

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

51.9

47.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.4

0.66

72.4

42.2

Minor 5ss

42.3

-0.8

3.2

55.3

48.9

Minor BPS

43.9

-0.6

2.3

56.61

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002845

10890087 - 10920575

30489