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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10990915_10992643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10990915 - 10992643

Intron Length:

1729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCACCTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ATGTACTAAAAT

Flanking Amino Acid:

EFEDTMVIDLPPSRNRRERA

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.3

75.9

35.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

72.6

0.51

0.8

69.7

Minor 5ss

30.6

-2.2

2.5

31.1

36.2

Minor BPS

52.1

0.15

72.78

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488