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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10992759_10993698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10992759 - 10993698

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTTTATTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

TCTTTATTAAAC

Flanking Amino Acid:

MKGRTGVRHAVRGLMEDDAE

Intron Amino Acid Position:

1106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.1

69.1

41.9

Major BPS

75.5

0.63

66.3

40.4

Major PPT

73.7

0.53

70.1

39.1

Minor 5ss

38.3

-1.3

3.3

46.2

Minor BPS

62.1

0.36

1.7

72.41

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488