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Intron Name: Anas_platyrhynchos_platyrhynchos_9_10993810_10996788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10993810 - 10996788

Intron Length:

2979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCAGTCATAATG

Flanking Amino Acid:

EQGSEQDFLHNPQMQISWLG

Intron Amino Acid Position:

1069

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

72.8

0.51

73.7

41.5

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

48.3

-0.2

1.8

52.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488