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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11000434_11004715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11000434 - 11004715

Intron Length:

4282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTTCTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTGTCTTCTATT

Flanking Amino Acid:

SKLLRQDKKTVHSYLEKFLT

Intron Amino Acid Position:

943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

87.1

0.83

0.7

84.7

28.8

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

54.5

0.22

1.9

75.66

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488