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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11004845_11007416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11004845 - 11007416

Intron Length:

2572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ACTTCTTTACTG

Flanking Amino Acid:

KTREAVATLHKDGIEFAFKY

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

35.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.2

0.82

0.7

81.8

28.6

Minor 5ss

30.7

-2.2

3.3

40.4

Minor BPS

58.2

0.12

1.7

60.82

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488