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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11014016_11017457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11014016 - 11017457

Intron Length:

3442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTACTCTTAATA

Flanking Amino Acid:

SNVNTPVKEQAFMLLCDLLM

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

88.4

0.86

0.7

85.7

28.6

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

74.2

0.75

1.1

77.44

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488