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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11038685_11041527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11038685 - 11041527

Intron Length:

2843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGATTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTGCTTTGGATT

Flanking Amino Acid:

MLVLFFLESELHEHAAYLVD

Intron Amino Acid Position:

459

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

74.3

0.55

0.9

66.1

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

49.8

0.07

1.4

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488