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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11041643_11043914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11041643 - 11043914

Intron Length:

2272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTGCTTATTT

Flanking Amino Acid:

AVAAGEFLHKKLFSRHDPQA

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

79.5

0.66

0.8

77.7

35.7

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

65.7

0.57

87.57

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488