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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11055600_11059686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11055600 - 11059686

Intron Length:

4087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTGCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ATCTGGTTAACT

Flanking Amino Acid:

IFKGIFVHRYRDAIAEIRAV

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.3

32.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

81.4

0.71

0.9

77.7

36.7

Minor 5ss

33.3

-1.9

2.9

41.3

44.8

Minor BPS

53.6

0.19

2.4

77.84

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019301

10990717 - 11064528

73812

ENSAPLT00000017114

10990717 - 11127204

136488