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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1108831_1109745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1108831 - 1109745

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGAAAA

Flanking Amino Acid:

RSGKRFLNSGGFIGYAPYIN

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.54

66.6

43.6

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

57.1

0.22

1.8

74.83

35.8

Associated Gene:

Gene:

PLOD2

Ensembl Gene ID:

ENSAPLG00000011127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039176

1086663 - 1134290

47628

ENSAPLT00000011705

1101365 - 1134290

32926

ENSAPLT00000046994

1075107 - 1134504

59398

ENSAPLT00000040431

1086663 - 1134290

47628