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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11230119_11231221_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11230119 - 11231221

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTCTTATAA

Flanking Amino Acid:

KGAKNFFEAKVQALSSASKF

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.9

0.51

1.1

74.8

32.9

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

60.3

0.32

1.7

73.91

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040548

11216847 - 11231801

14955