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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11254320_11260711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11254320 - 11260711

Intron Length:

6392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATC

5'SS Class:

major

3'SS Sequence:

TTCTTCTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGAATCTCACCT

Flanking Amino Acid:

ALVPFTEEEQRNFSMSVNSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

79.1

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

0.9

80.4

31.6

Minor 5ss

42.7

-0.8

2.5

54.7

42.5

Minor BPS

46.3

-0.2

1.8

61.04

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794