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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1127622_1128780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1127622 - 1128780

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTAC

5'SS Class:

major

3'SS Sequence:

TCCTTCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTCTCCTTCATT

Flanking Amino Acid:

MAFCRNAREMTLQREKDSPS

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

64.6

35.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

79.4

0.66

0.8

77.8

29.4

Minor 5ss

37.2

-1.4

3.3

46.7

43.5

Minor BPS

72.9

0.8

1.7

87.41

38.9

Associated Gene:

Gene:

PLOD2

Ensembl Gene ID:

ENSAPLG00000011127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040431

1086663 - 1134290

47628

ENSAPLT00000011705

1101365 - 1134290

32926

ENSAPLT00000046994

1075107 - 1134504

59398