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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1127622_1130054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1127622 - 1130054

Intron Length:

2433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTAC

5'SS Class:

major

3'SS Sequence:

CTGTTTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTTTTGCTAATG

Flanking Amino Acid:

MAFCRNAREMGVFMYITNRH

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

64.6

35.8

Major BPS

76.8

0.67

40.9

Major PPT

69.2

0.43

65.2

41.1

Minor 5ss

37.2

-1.4

3.3

46.7

43.5

Minor BPS

46.9

-0.3

2.3

60.16

42.1

Associated Gene:

Gene:

PLOD2

Ensembl Gene ID:

ENSAPLG00000011127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039176

1086663 - 1134290

47628