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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11287779_11292491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11287779 - 11292491

Intron Length:

4713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCGTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TTCCCCCCACCT

Flanking Amino Acid:

DGERWRPHSPGWREHMERRR

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

78.6

0.64

0.8

72.3

32.4

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

46.5

-0.1

2.1

70.64

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794