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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1128844_1130054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1128844 - 1130054

Intron Length:

1211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTTGATT

5'SS Class:

major

3'SS Sequence:

CTGTTTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTTTTGCTAATG

Flanking Amino Acid:

ETFHMLRPPKGVFMYITNRH

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

73.1

37.1

Major BPS

76.8

0.67

40.9

Major PPT

69.2

0.43

65.2

41.1

Minor 5ss

38.9

-1.2

3.3

47.4

Minor BPS

46.9

-0.3

2.3

60.16

42.1

Associated Gene:

Gene:

PLOD2

Ensembl Gene ID:

ENSAPLG00000011127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046994

1075107 - 1134504

59398

ENSAPLT00000040431

1086663 - 1134290

47628

ENSAPLT00000011705

1101365 - 1134290

32926