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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11296835_11297231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11296835 - 11297231

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATTATG

5'SS Class:

major

3'SS Sequence:

TATTCCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TATTCCTAAACA

Flanking Amino Acid:

TPGPAPLPHLGELDQERLTR

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

76.4

38.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

71.2

0.48

Minor 5ss

39.6

-1.2

2.8

48.4

41.6

Minor BPS

0.84

1.6

84.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794