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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11300678_11305281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11300678 - 11305281

Intron Length:

4604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCAACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTTATAGATT

Flanking Amino Acid:

EEEELARRKQEEALRRQREQ

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

0.52

0.9

63.3

37.2

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

49.1

0.02

1.9

72.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014855

11248978 - 11314771

65794