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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11305441_11306556_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

11305441 - 11306556

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAACA

5'SS Class:

major

3'SS Sequence:

ATGTGCTGGGAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATGT

Flanking Amino Acid:

RQREELLRKQEEEAAKWARE

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

0.9

72.8

31.2

Major BPS

78.8

0.72

67.9

40.1

Major PPT

48.9

-0

1.2

49.1

43.6

Minor 5ss

27.7

-2.6

2.8

32.3

41.9

Minor BPS

72.3

0.78

1.9

91.83

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794