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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11306794_11307409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11306794 - 11307409

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATCCCTAATG

Flanking Amino Acid:

QQQQQLAQMKLPSSSTWGQQ

Intron Amino Acid Position:

922

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

75.8

38.1

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

62.5

0.25

1.7

66.64

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794