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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11307533_11308135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11307533 - 11308135

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTGTTTGCTACA

Flanking Amino Acid:

EERERQLREEQRRQQRELMK

Intron Amino Acid Position:

963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

30.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

0.72

0.9

76.6

37.7

Minor 5ss

34.7

-1.7

3.3

50.4

Minor BPS

41.9

-0.6

2.3

58.13

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794