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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11309122_11310425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11309122 - 11310425

Intron Length:

1304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCTGCACGCACA

Flanking Amino Acid:

HALNTANNLDVPTFVSFLKE

Intron Amino Acid Position:

1151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.6

38.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

92.6

0.96

0.6

88.3

21.3

Minor 5ss

32.3

-2

3.5

44.3

45.4

Minor BPS

38.8

-0.8

2.3

53.96

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014855

11248978 - 11314771

65794

ENSAPLT00000038681

11248978 - 11314771

65794