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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11310596_11310971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11310596 - 11310971

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CATTTTATAATG

Flanking Amino Acid:

SQQRQQQQQQDSVWGMNHSS

Intron Amino Acid Position:

1208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.76

0.8

76.9

37.3

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

51.2

-0.1

1.6

56.43

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038681

11248978 - 11314771

65794

ENSAPLT00000014855

11248978 - 11314771

65794