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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11338198_11340188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11338198 - 11340188

Intron Length:

1991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

TTTCTCTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

ACTCACTCACTT

Flanking Amino Acid:

TYQERAYKQLLQDKPAFREV

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.2

36.4

Major BPS

59.9

0.25

1.2

38.9

Major PPT

86.2

0.81

0.6

22.5

Minor 5ss

44.4

-0.6

2.8

40.1

Minor BPS

44.8

-0.3

1.9

61.09

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014593

11328785 - 11376170

47386