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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11340342_11340541_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11340342 - 11340541

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTATCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTTCTTATCT

Flanking Amino Acid:

NVLDVMAVSERFLLDLEQRV

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.4

39.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.6

0.76

0.8

78.2

35.4

Minor 5ss

32.7

-2

3.1

43.6

Minor BPS

75.3

0.87

1.5

89.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014593

11328785 - 11376170

47386