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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11347828_11352246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11347828 - 11352246

Intron Length:

4419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CATTGCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTCACTGTAACC

Flanking Amino Acid:

DSWRNLIEHIGLLYQEYRDK

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

71.4

0.53

1.2

63.4

Major PPT

67.7

0.4

0.9

58.5

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

56.1

0.17

2.1

70.49

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014593

11328785 - 11376170

47386