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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11380919_11386742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11380919 - 11386742

Intron Length:

5824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGTGGGTTAAAA

Flanking Amino Acid:

MDASVMASIPVLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.1

38.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

79.3

0.66

0.7

73.1

31.8

Minor 5ss

28.3

-2.5

2.8

33.2

41.9

Minor BPS

44.4

-0.4

2.5

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014494

11380908 - 11389618

8711