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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11419656_11421895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11419656 - 11421895

Intron Length:

2240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGGAT

U12 Branch Point Sequence:

TCCTCCTCATTA

Flanking Amino Acid:

EAPDEPEEDADMVPTPPILP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

80.7

31.6

Major BPS

47.6

-0.1

1.5

46.5

Major PPT

70.8

0.47

0.8

70.7

28.8

Minor 5ss

38.2

-1.3

3.1

49.9

40.6

Minor BPS

52.3

0.07

1.8

63.02

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046453

11394663 - 11446031

51369

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722