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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11422068_11423316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11422068 - 11423316

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTTTTTGACT

Flanking Amino Acid:

LQRLQYQDTSSVSDEHLKLI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

81.4

0.71

0.8

73.3

37.1

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

75.9

0.9

1.1

85.97

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046453

11394663 - 11446031

51369

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722