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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11423458_11428157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11423458 - 11428157

Intron Length:

4700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAC

U12 Branch Point Sequence:

TCAGCCTTAGAC

Flanking Amino Acid:

LLTLLCKGLFSEASRTLPSL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

56.9

0.17

1.1

56.1

39.6

Major PPT

0.67

0.8

72.1

37.9

Minor 5ss

36.1

-1.6

2.6

Minor BPS

50.8

1.8

60.43

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039963

11394663 - 11445384

50722

ENSAPLT00000021190

11394663 - 11445384

50722

ENSAPLT00000046453

11394663 - 11446031

51369