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Intron Name: Anas_platyrhynchos_platyrhynchos_9_11428246_11428825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11428246 - 11428825

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CTATGGTTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTATGGTTATCA

Flanking Amino Acid:

LHPGIHQRSQMLGEASPVNI

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

66.4

45.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

68.6

0.42

66.2

43.9

Minor 5ss

35.3

-1.7

2.9

41.6

38.9

Minor BPS

43.9

-0.4

2.5

59.53

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021190

11394663 - 11445384

50722

ENSAPLT00000046453

11394663 - 11446031

51369

ENSAPLT00000039963

11394663 - 11445384

50722